Christoph W. Sensen Publications

Phone: [1] 403 220-4301 | Fax: [1] 403 210-9399 | E-mail: csensen@ucalgary.ca

Publications | Reviewed Conference Proceedings | Reviewed Poster Papers | Books edited | Online Books edited | Abstract Collections | Book Chapters | Prefaces | Disclosures | Abstracts and unreviewed Publicatons | Electronic Publications | Posters | Talks

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Publications:

(ncbi_res.gif (315 bytes) links to the NCBI PubMed abstracts)

  1. Schneider- Poetsch, H.A.W., Sensen, C., Hanelt, S. (1991) Are Bacterial Sensory Systems Models for Phytochrome Action? Hydrophobic Cluster Analysis of the Phytochrome Module Related to Bacterial Transmitter Modules. Z. Naturforsch. 46c:750-758
  2. Sensen, C. W., Heimann, K., Melkonian, M. (1993) The production of clonal and axenic cultures of microalgae using fluorescence activated cell sorting (FACS). Eur J Phycol 28:93-97 (online)
  3. Wiemann, S., Voss, H., Schwager, C., Rupp, T., Stegemann, J., Zimmermann, J., Grothues, D., Sensen, C., Erfle, H., Hewitt, N., Banrevi, A., Ansorge, W. (1993) Sequencing and Analysis of 51.6 kilobases on the Left Arm of Chromosome XI from Saccharomyces cerevisiae Reveals 23 Open Reading Frames Including the FAS1 Gene. Yeast 9:1343-1348 ncbi_res.gif (315 bytes)
  4. Voss, H., Wiemann, S. Grothues, D., Sensen, C., Zimmermann, J., Schwager, C., Stegemann, J., Erfle, H., Rupp, T., Ansorge, W. (1993) Automated Low- Redundancy Large- Scale DNA Sequencing by Primer Walking. Biotechniques 15:714-721 ncbi_res.gif (315 bytes)
  5. Grothues D., Voss H., Stegemann J., Wiemann S., Sensen C., Zimmermann J., Schwager C., Erfle H., Rupp T., Ansorge W. (1993) Separation of up to 1000 bases on a modified A.L.F. DNA sequencer. Nucl. Acids Res. 21:6042-6044 ncbi_res.gif (315 bytes) (online)
  6. Dujon B., ..., Sensen C., ... et al. (1994) Complete DNA sequence of yeast chromosome XI. Nature 396:371-378 ncbi_res.gif (315 bytes)
  7. Voss H., Tamames J., Teodoru C., Valencia A., Sensen C., Wiemann S., Schwager C., Zimmermann J., Sander C., Ansorge W. (1995) Nucleotide sequence and analysis of the centromeric region of yeast chromosome IX. Yeast 11:61-78 ncbi_res.gif (315 bytes)
  8. Kranz H.D., Miks D., Siegler M.L., Capesius I., Sensen C.W., Huss V.A.R. (1995) The Origin of Land Plants: Phylogenetic Relationships between Charophytes, Bryophytes, and a Club Moss Inferred from Complete Small Subunit Ribosomal RNA Gene Sequences. J. Mol. Evol. 41:74-84 ncbi_res.gif (315 bytes)
  9. Gaasterland T., Sensen C. W. (1996) MAGPIE: Using multiple tools for automated genome interpretation. Trends in Genetics 12:76-78 ncbi_res.gif (315 bytes)
  10. Keeling P.J., Klenk H.P., Singh R.K., Feeley O., Schleper C., Zillig W., Doolittle W.F., Sensen C.W. (1996) Complete Nucleotide Sequence of the Sulfolobus islandicus Multicopy Plasmid pRN1. Plasmid 35:141-144 ncbi_res.gif (315 bytes)
  11. Charlebois R.L., Gaasterland T., Ragan M.A., Doolittle W.F., Sensen C.W. (1996) The Sulfolobus solfataricus P2 genome project. FEBS Letters 389:88-91 ncbi_res.gif (315 bytes)
  12. Sensen C.W., Klenk H.P., Singh R. K., Allard G., Chan C.C.-Y., Liu Q., Penny S., Young F., Schenk M., Gaasterland T., Doolittle W.F., Ragan M.A., Charlebois R.L. (1996) Organizational characteristics and information content of an archaeal genome: 156 kbp of contiguous sequence from Sulfolobus solfataricus P2. Mol. Microbiol. 22:175-191   ncbi_res.gif (315 bytes)
  13. Gaasterland T., Sensen C.W. (1996) Fully automated genome analysis that reflects user needs and preferences - A detailed introduction to the MAGPIE system architecture -. Biochimie 78:302-310  ncbi_res.gif (315 bytes)
  14. Ragan M.A., Logsdon J.M. Jr., Sensen C.W., Charlebois R.L., Doolittle W.F. (1996) An archaeal homolog of pelota, a meiotic cell division protein in eukaryotes. FEMS Microbiology Letters 144:151- 155 ncbi_res.gif (315 bytes)
  15. Charlebois R.L., Sensen C.W., Doolittle W.F., Brown J.R. (1997) Evolutionary analysis of the hisCGABdFDEHI gene cluster from the archaeon Sulfolobus solfataricus P2. J. Bacteriol. 179:4429-4432 ncbi_res.gif (315 bytes) (online)
  16. Patwary M.U., Sensen C.W., MacKay R.M., van der Meer J.P. (1998) Nucleotide sequences of small-subunit and internal transcribed spacer regions of nuclear rRNA genes support the autonomy of some genera of the Gelidiales (Rhodophyta). J. Phycol 34:299-305
  17. Sensen C.W., Charlebois R.L., Chow C., Clausen I.G., Curtis B., Doolittle W.F., Duguet M., Erauso G., Gaasterland T., Garrett R.A., Gordon P., Heikamp de Jong I., Jeffries A.C., Kozera C., Medina N., De Moors A., van der Oost J., Phan H., Ragan M.A., Schenk M.E., She Q., Singh R.K., Tolstrup N. (1998) Completing the sequence of the Sulfolobus solfataricus P2 genome. Extremophiles 2:305-312 ncbi_res.gif (315 bytes)
  18. Keeling P.J., Klenk H.-P., Singh R.K., Schenk M.E., Sensen C.W., Zillig W., Doolittle W.F. (1998) Sulfolobus islandicus plasmids pRN1 and pRN2 share distant but common evolutionary ancestry. Extremophiles 2:391-393 ncbi_res.gif (315 bytes)
  19. Charlebois R.L., She Q., Sprott D.B., Sensen C.W., Garrett R.A. (1998) Sulfolobus genome: from genomics to biology. Curr. Opin. Microbiol. 1:584-588 ncbi_res.gif (315 bytes)
  20. Romine M.F., Stilwell, L., Wong K.-K., Thurston S.J., Sisk E.C., Sensen C., Gaasterland T., Frederickson J.K., Saffer. J.D. (1999) Complete Sequence of a 184-Kilobase Catabolic Plasmid from Sphingomonas aromaticivorans Strain F199. J. Bacteriol. 181:1585-1602 ncbi_res.gif (315 bytes) (online)
  21. Napoli A., van der Oost J., Sensen C., Charlebois R.L., Rossi M., Ciamarella M. (1999) An Lrp-like Protein of the Hyperthermophilic Archaeon Sulfolobus solfataricus Which binds to its own promoter. J. Bacteriol. 181:1474-1480 ncbi_res.gif (315 bytes) (online)
  22. Albers S.-V., Elferink M.G.L., Charlebois R.L., Sensen C.W. Driessen A.J.M. Konings W.N. (1999) Glucose transport in the extremely thermoacidophilic Sulfolobus solfataricus involves a high affinity membrane-integrated binding protein. J Bacteriol. 181:4285-4291 ncbi_res.gif (315 bytes) (online)
  23. Brooks-Wilson A., Marcil M., Clee S.M., Zhang L.H., Roomp K., van Dam M., Yu L., Brewer C., Collins J.A., Molhuizen H.O.F., Loubse O., Ouellette B.F.F., Fichter K., Ashbourne-Excoffon K.J.D., Sensen C.W., Scherer S., Mott S., Denis M., Martindale D., Frohlich J., Morgan K., Koop B., Pimstone S., Kastelein J.J.P., Genest Jr. J., Hayden M.R. (1999) Mutations in the ABC1 gene in Tangier disease and familial high-density lipoprotein deficiency. Nature Genetics 22:336-345 ncbi_res.gif (315 bytes)
  24. Kletzin A., Liedke A., Ulrich T., Charlebois R.L., Sensen C.W. (1999) Molecular analysis of pDL10 from Acidianus ambivalens reveals a family of plasmids from extremely thermophilic and acidophilic Archaea. Genetics 152:1307-1314 ncbi_res.gif (315 bytes) (online)
  25. De Felice M., Sensen C.W., Charlebois R., Rossi M., Pisani F.M. (1999) Two DNA polymerase sliding clamps from the archaeon Sulfolobus solfataricus. J. Mol. Biol. 291:47-57 ncbi_res.gif (315 bytes) (online)
  26. Marcil M., Brooks-Wilson A., Clee S.M., Roomp K., Zhang L.H., Yu L., Collins J.A., van Dam M., Molhuize H.O., Loubster O., Ouellette B.F., Sensen C.W., Fichter K., Mott S., Denis M., Boucher B., Pimstone S., Genest J. Jr., Kastelein J.J., Hayden M.R. (1999) Mutations in the ABC1 gene in familial HDL deficiency with defective cholesterol efflux. Lancet 16;354(9187):1341-1346 ncbi_res.gif (315 bytes) (online)
  27. Charlebois R.L., Singh R.K., Chan-Weiher C.C.-Y., Allard G., Chow C., Confalonieri F., Curtis B., Duguet M., Erauso G., Faguy D., Gaasterland T., Garrett R.A., Gordon P., Jeffries A.C., Kozera C., Kushwaha N., Lafleur É., Medina N., Peng X., Penny S.L., She Q., St. Jean A., van der Oost J., Zivanovic Y., Doolittle W.F., Ragan M.A., Sensen C.W. (2000) Gene content and organization of a 281-kbp contig from the genome of the extremely thermophilic archaeon, Sulfolobus solfataricus P2. Genome 43:116-136
  28. Martusewitsch E., Sensen C., Schleper C. (2000) High spontaneous mutation rate in the hyperthermophilic archaeon Sulfolobus solfataricus is mediated by transposable elements. J. Bact. 182:2574-2581 (online)
  29. Gaasterland T., Sczyrba A., Thomas E., Aytekin-Kurban G., Gordon P., Sensen C.W. (2000) MAGPIE/EGRET Annotation of the 2.9 Mb Drosophila melanogaster ADH Region. Genome Research 10:502-510 (online)
  30. Hanneart V., Brinkmann H., Nowitzki U., Lee J.A., Albert M.-A., Sensen C.W., Gaasterland T., Müller M., Michels P., Martin W. (2000) Enolase from Trypanosoma brucei, from the amitochondriate protist Mastigamoeba balamuthi, and from the chloroplast and cytosol of Euglena gracilis: Pieces in the evolutionary puzzle of the eukaryotic glycolytic pathway. Mol. Biol. Evol. 17:989-1000 (online)
  31. Tolstrup N., Sensen C.W., Garrett R.A., Clausen I.G. (2000) Two different and highly organized mechanisms of translation initiation in the archaeon Sulfolobus solfataricus. Extremophiles 4:175-179 
  32. Moracci M., Ponzano B.C., Trincone A., Fusco S., De Rosa M., van Der Oost J., Sensen C.W., Charlebois R.L., Rossi M. (2000) Identification and molecular characterization of the first alpha -xylosidase from an archaeon. J. Biol. Chem. 275:22082-22089 (online)
  33. Martino A., Schiraldi C., Fusco S., Di Lernia I., Costabile T., Pellicano T., Marotta M., Generoso M., van der Oost J., Sensen C.W., Charlebois R.L., Moracci M., Rossi M., and De Rosa M. (2001) Properties of the recombinant a–glucosidase from Sulfolobus solfataricus in relation to starch processing. Journal of Molecular Catalysis B: Enzymatic 11:4-6
  34. She Q., Singh R.K., Confalonieri F., Zivanovic Y., Allard G., Awayez M.J., Chan-Weiher C.C.-Y., Clausen I.G., Curtis B.A., De Moors A., Erauso G., Fletcher C., Gordon P.M.K., Heikamp-de Jong I., Jeffries A.C., Kozera C.J., Medina N., Peng X., Thi-Ngoc H.P., Redder P., Schenk M.E., Theriault C., Tolstrup N., Charlebois R.L., Doolittle W.F., Duguet M., Gaasterland T., Garrett R.A., Ragan M.A., Sensen C.W. and Van der Oost J. (2001) The complete genome of the crenarchaeon Sulfolobus solfataricus P2. PNAS 98:7835-7840 (online)
  35. Müller M., Lee J.A., Gordon P., Gaasterland T., Sensen C.W. (2001) The presence of prokaryotic and eukaryotic species in all subgroups of the PPi-dependent Group II phosphofructokinase protein family. J. Bacteriol. 183:6714-6716 (online)
  36. Bapteste E., Brinkmann H., Lee J.A., Moore D.V., Sensen C.W., Gordon P., Duruflé L., Gaasterland T., Lopez P., Müller M., Philippe H. (2002) The analysis of 100 genes supports the grouping of three highly divergent amobae: Dictyostelium, Entamoeba and Mastigamoeba. PNAS 99:1414-1419 (online)
  37. Arisue N., Hashimoto T., Lee J.A., Moore D.V., Gordon P., Sensen C.W., Gaasterland T., Hasegawa M., Müller M. (2002) The phylogenetic position of the pelobiont Mastigamoeba balamuthi based on sequences of rDNA and translation elongation factors EF-1alpha and EF-2. J. Eukaryot. Microbiol. 49:1-10
  38. Nantel A., Dignard D., Bachewich C., Harcus D., Marcil A., Bouin A.-P., Sensen C.W., Hogues H., van het Hoog M., Gordon P., Rigby T., Benoit F., Tessier D.C., Thomas D.Y., Whiteway M. (2002) Transcription profiling of Candida albicans cells undergoing the yeast-to-hyphal transition. Mol. Biol. Cell 13:3452-3465 (online)
  39. Quaiser A., Ochsenreiter T., Klenk H.-P., Kletzin A.,  Treusch A.H., Meurer G., Eck J., Sensen C. and Schleper C. (2002) First Insight into the Genome of an Uncultivated Crenarchaeote from Soil. Environmental Microbiology 4:603-611
  40. Sensen C.W. (2002) Using CAVE® Technology for Functional Genomics Studies. Diabetes Technology & Therapeutics 4:867-871
  41. Sensen C.W. (2003) From Model Organisms to Organismal Models: Visualizing Complex Genomic Datasets. Biosilico 1:23-26
  42. Quon G.T., Gordon P., Sensen C.W. (2003) 4D Bioinformatics: A New Look at the Ribosome as an Example. IUBMB Life 55:279-283
  43. Cooper D.M.L., Turinsky A.L., Sensen C.W., Hallgrímsson B. (2003) Quantitative 3D Analysis of the Canal Network in Cortical Bone by Micro-Computed Tomography. Anat. Rec. 274:169-179
  44. Siebers B, Tjaden B, Michalke K, Dörr C, Ahmed H, Zaparty M, Gordon P, Sensen CW, Zibat A, Klenk H-P, Schuster SC, Hensel R (2004) Reconstruction of the Central Carbohydrate Metabolism of Thermoproteus tenax by Use of Genomic and Biochemical Data. J Bacteriol. 186:2179-2194 (online)
  45. Turinsky A., Ah-Seng A.C., Gordon P.M.K., Stromer J.N., Taschuk M.L., Xu E.W., Sensen C.W. (2004) Bioinformatics Visualization and Integration with Open Standards: The Bluejay Genomic Browser. In Silico Biol. 5:0018 (online)
  46. Gordon P.M.K., Sensen C.W. (2004) Osprey: A comprehensive tool employing novel methods for the design of oligonucleotides for DNA sequencing and microarrays. Nucleic Acids Research 29:e133 (online)
  47. He G.H.Y., Helbing C.C., Wagner M.J., Sensen C.W., Riabowol K. (2005) Phylogenetic analysis of the ING family of PHD finger proteins. Molecular Biology and Evolution 22:104-116 (online)
  48. Stromer J.N., Quon G.T., Gordon P.M.K., Turinsky A.L., Sensen C.W. (2005) JABIRU: Harnessing Java 3D Behaviours for Device and Display Portability. IEEE Computer Graphics & Application 25:70-80
  49. Technau U., Rudd S., Maxwell P., Gordon P.M.K., Saina M., Grasso L.C., Hayward D.C., Sensen C.W., Saint R., Holstein T.W., Ball E.E., Miller D.J. (2005) Maintenance of non-metazoan genes in two basal cnidarians. Trends in Genetics 21:633-639 (online)
  50. Turinsky A., Sensen C.W. (2006) On the Way to Building an Integrated Computational Environment for the Study of Developmental Patterns and Genetic Diseases. International Journal of Nanomedicine 1:89-96 (online)
  51. Gordon P.M.K., Weinel C., Jacobi C., Kämpf U., Kriventseva E., Sensen C.W. (2006) Creating hierarchical models of protein families based on ESTs: The "Sprockets" analysis pipeline. Analytica Chimica Acta 564:123-132
  52. Murata J., Bienzle D., Brandle J.E., Sensen C.W., De Luca V. (2006) Expressed sequences tags from Madagascar periwinkle (Catharanthus roseus). FEBS Letters 580:4501-4507
  53. Liapounova N.A., Hampl V., Gordon P.M.K., Sensen C.W., Gedamu L., Dacks J.B. (2006) Reconstructing the Mosaic Glycolytic Pathway of the Anaerobic Eukaryote Monocercomonoides. Eukaryotic Cell 5:2138-2146 (online)
  54. Zulak K.G., Cornish A., Daskalchuk T.E., Deyholos M.K., Goodenowe D.B., Gordon P.M.K., Klassen D., Pelcher L.E., Sensen C.W., Facchini P.J. (2006) Gene Transcript and Metabolite Profiling of Cultured Opium Poppy Cells Reveals the Integrated Biochemical Machinery of an Alkaloid Factory. Planta 225:1085-1106
  55. Cooper D.M.L., Thomas C.D., Clement J.G., Turinsky A.L., Sensen C.W., Hallgrímsson B. (2007) Age-dependent change in the 3D structure of cortical porosity at the human femoral midshaft. Bone 40:957-965
  56. Gordon P.M.K., Trinh Q., Sensen C.W. (2007) Semantic Web Service Provision: a Realistic Framework for Bioinformatics Programmers. Bioinformatics 23:1178-1180
  57. Cooper D.M.L., Turinsky A.L., Sensen C.W., Hallgrímsson B. (2007) Effect of Voxel Size on 3D Micro-CT Analysis of Cortical Bone Porosity. Calcified Tissue International 80:211-219
  58. Ruecker N.J., Braithwaite S.L., Topp E., Edge T., Lapen D.R., Wilkes G., Robertson W., Medeiros D., Sensen C.W., Neumann N.F. (2007) Tracking Host Sources of Cryptosporidium spp. in Raw Water for Improved Health Risk Assessment. Applied and Environmental Microbiology 73:3945-3957 (online)
  59. Fröls S., Gordon P.M.K., Arcellana Panlilio M., Schleper C., Sensen C.W. (2007) Elucidating the transcription cycle of the UV-inducible hyperthermophilic archaeal virus SSV1 by DNA microarrays. Virology 15:48-59
  60. Gordon P.M.K., Sensen C.W. (2007) Seahawk: moving beyond HTML in Web-based bioinformatics analysis. BMC Bioinformatics 18:208 (online)
  61. Fröls S., Gordon P.M.K., Arcellana Panlilio M., Duggin I.G., Bell S.D., Sensen C.W., Schleper C. (2007) Response of the hyperthermophilic archaeon Sulfolobus solfataricus to UV damage. J. Bacteriol. 189:8708-8718 (online)
  62. Turinsky A.L., Fanea E., Trinh Q., Dong X., Shu X., Stromer J.N., Wat S., Hallgrímsson B., Hill J.W., Edwards C., Grosenik B., Yajima M., Sensen C.W. (2008) CAVEman: Standardized Anatomical Context for Biomedical Data Mapping. Anatomical Science Education 1:10-18 (online)
  63. Caffrey S.M., Park H.-S., Been J., Gordon P., Sensen C.W., Voordouw G. (2008) Gene expression of the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough grown on an iron electrode under cathodic protection conditions. Applied Environmental Microbiology 74:2404-2413 (online)
  64. Ruan Y., Sensen C.W., van der Hoorn F.A. (2008) A Novel Group of Multi-GAP-Domain Proteins. Molecular Reproduction and Development 75:1578-1589
  65. Wilkinson M.D., Senger M., Kawas E., Bruskiewich R., Carrere S., Gouzy J., Noirot C., Bardou P., Ng A., Haase D., de Andres Saiz E., Wang D., Gibbons F., Gordon P.M.K., Sensen C.W., Rodgriguez Carrasco J.M., Fernández J.M., Shen L., Links M., Ng M., Opushneva N., Neerincx P., Ernst R., Twigger S., Usadel B., Good B., Wong Y., Stein L., Crosby W., Karlsson J., Royo R., Párraga I., Ramirez S., Gelpi J.L., Trelles O., Pisano D.G., Jimenez N., Kerhornou A., Rosset R., Zamacola L., Tarraga J., Huerta-Cepas J., Carazo J.M., Dopazo J., Guigo R., Navarro A., Orozco M., Valencia A., Claros G., Perez-Pulido A., Rojano M.M., Fernandez-Santa Cruz R., Navas I., Schiltz G., Farmer A., Gessler D., Schoof H., Groscurth A. (2008) Interoperability with Moby 1.0 - It's Better than Sharing Your Toothbrush! Brief. Bioinform. 9:220-231
  66. Turinsky A.L., Fanea E., Trinh Q., Dong X., Stromer J.N., Shu X., Wat S., Hallgrímsson B., Hill J.W., Edwards C., Grosenik B., Yajima M., Sensen C.W. (2008) Integration of Genomic and Medical Data into a 3D Atlas of Human Anatomy. Studies in Health Technology and Informatics 132:526-531
  67. Borowski K., Soh J., Sensen C.W. (2008) Visual Comparison of Multiple Gene Expression Datasets in a Genomic Context. Journal of Integrative Bioinformatics 5:1-10 (online)
  68. Gordon P.M.K., Soliman M.A., Bose P., Trinh Q., Sensen C.W., Riabowol K. (2008) Interspecies data mining to predict novel protein-protein interactions in human. BMC Genomics 18:426 (online)
  69. Soh J., Gordon P.M.K., Taschuk M.L., Dong A., Ah-Seng A.C., Turinsky A.L., Sensen C.W. (2008) Bluejay 1.0: genome browsing and comparison with rich customization provision and dynamic resource linking. BMC Bioinformatics 9:450 (online)
  70. Gordon P.M.K., Schütz E., Beck J., Urnovitz H.B., Graham C., Clark R., Dudas S., Czub S., Sensen M., Brenig B., Groschup M.H., Church R.B., Sensen C.W. (2008) Disease-Specific Motifs can be identified in Circulating Nucleic Acids from live Elk and Cattle infected with Transmissible Spongiform Encephalopathies. Nuc. Ac. Res. 37:550-556 (online)
  71. Antranikian G., Ruepp A., Gordon P.M.K., Ballschmiter A., Zibat A., Sensen C.W., Frishman D., Liebl W., Klenk H.-P. (2009) Rapid access to genes of biotechnologically useful enzymes by partial genome sequencing: the thermoalkaliphile Anaerobranca gottschalkii. Journal of Molecular Microbiology and Biotechnology 16:81-90
  72. Soh J., Turinsky A.L., Trinh Q.M., Chang J., Sabhaney A., Dong X., Gordon P.M.K., Janzen R.P.W., Hau D., Wishart D.S., Sensen C.W. (2009) Spatiotemporal Integration of Molecular and Anatomical Data in Virtual Reality using Semantic Mapping. Int. J. Nanomedicine 4:79-89 (online)
  73. Toronto International Data Release Workshop Authors. Birney E., Hudson T.J., Green E.D., Gunter C., Eddy S., Rogers J., Harris J.R., Ehrlich S.D., Apweiler R., Austin C.P., Berglund L., Bobrow M., Bountra C., Brookes A.J., Cambon-Thomsen A., Carter N.P., Chisholm R.L., Contreras J.L., Cooke R.M., Crosby W.L., Dewar K., Durbin R., Dyke S.O., Ecker J.R., El Emam K., Feuk L., Gabriel S.B., Gallacher J., Gelbart W.M., Granell A., Guarner F., Hubbard T., Jackson S.A., Jennings J.L., Joly Y., Jones S.M., Kaye J., Kennedy K., Knoppers B.M., Kyrpides N.C., Lowrance W.W., Luo J., MacKay J.J., Martin-Rivera L., McCombie W.R., McPherson J.D., Miller L., Miller W., Moerman D., Mooser V., Morton C.C., Ostell J.M., Ouellette B.F., Parkhill J., Raina P.S., Rawlings C., Scherer S.E., Scherer S.W., Schofield P.N., Sensen C.W., Stodden V.C., Sussman M.R., Tanaka T., Thornton J., Tsunoda T., Valle D., Vuorio E.I., Walker N.M., Wallace S., Weinstock G., Whitman W.B., Worley K.C., Wu C., Yu J. (2009) Prepublication data sharing. Nature 461:168-170
  74. Xiao M., Soh J., Meruvia-Pastor O., Schmidt E., Hallgrímsson B., Sensen C.W. (2010) Building Generic Anatomical Models Using Virtual Model Cutting and Iterative Registration. BMC Medical Imaging 10:5 (online)
  75. Zuccolo J., Bau J., Childs S., Goss G., Sensen C.W., Deans J. (2010) Phylogenetic Analysis of the MS4A and TMEM176 Gene Families. PLoS One 5:e9369 (online)
  76. Schmidt E.J., Parsons T.E., Jamniczky H.A., Gitelman J., Trpkov C., Boughner J., Logan C.C., Sensen C.W., Hallgrímsson B. (2010) Micro-computed tomography-based phenotypic approaches in embryology: Sources and effects of procedural artifacts on assessments of embryonic craniofacial growth and development. BMC Developmental Biology 10:18 (online)

Reviewed Conference Proceedings:

  1. Gordon P., Sensen C.W. (2000) Bluejay: A Browser for Linear Units in Java. In: Pollard, A. Mewhort D.J.K., Weaver D.F. [eds.] High Performance Computing Systems and Applications. Kluwer Academic Publishers, pp. 183-194
  2. Gordon P.M.K., Stromer J., Turinsky A.L., Xu E., Sensen C.W. (2004) Bluejay: A Biologcial Sequence Browser featuring Knowledge Integration. Proceedings of the Fourth Virtual Conference on Genomics and Bioinformatics 3:4-11 (online)
  3. Pan Y., Sensen C.W. (2005) Modular Neural Networks and their Application in Exon Prediction. In: M. He, S. Narasimhan, S. Petoukhov [eds.] Advances in Bioinformatics and its Applications. World Scientific Publishing Co. Pte. Ltd. pp. 47-61
  4. Wang C., Gordon P.M.K., Turinsky A.L., Sensen C.W. (2007) Combining a High-throughput Bioinformatics Grid and Bioinformatics Web Services. In: Dubitzky W., Schuster A., Sloot P.M.A., Schroeder M., Romberg M [eds.] Distributed, High-Performance and Grid Computing in Computational Biology (GCCB 2006 Conference Proceedings). Springer Berlin - Heidelberg, pp. 1-10
  5. Dong A., Turinsky A.L., Ah-Seng A., Taschuk M., Gordon P.M.K., Hochauer K., Fröls S., Soh J., Sensen C.W. (2007) Enhancing Bluejay with Scalability, Genome Comparison and Microarray Visualization. In: Decker R., Lenz H.-J. [eds.] Advances in Data Analysis (GfKl 2006 Conference Proceedings). Springer Berlin - Heidelberg pp. 557-568
  6. Soh J., Gordon P.M.K., Ah-Seng A., Turinsky A., Taschuk M., Borowski K., Sensen C.W. (2007) Bluejay: A Highly Scalable and Integrative Visual Environment for Genome Exploration. In: Proceedings of the IEEE Congess on services [The 1st IEEE International Workshop on Service Oriented Technologies for Biological Databases and Tools, Salt Lake City, Utah] pp. 92-98
  7. Gordon P.M.K., Kawas E., Wilkinson M.D., Sensen C.W. (2007) Using a novel data transformation technique to provide the EMBOSS software suite as Semantic Web Services. In: Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine (San Jose, CA) pp. 117-124
  8. Gordon P., Sensen C.W. (2008) Bridging Existing Bioinformatics Resources Into the Semantic Web. In: SIG Meeting Program Materials for the 16th Annual International Conference on Intelligent Systems for Molecular Biology (Toronto, Canada) p.146
  9. Borowski K, Soh J., Sensen C.W. (2008) Visual Comparison of Multiple Gene Expression Datasets in a Genomic Context. In: Proceedings of the 5th International Symposium on Integrative Bioinformatics (Leucorea, Lutherstadt Wittenberg) pp.103-116
  10. Gordon P.M.K., Sensen C.W. (2008) Creating Bioinformatics Semantic Web Services from Existing Web Services: A real-world application of SAWSDL. In: Proceedings of the IEEE International Conference on Web Services (Beijing, China) pp. 608-614
  11. Meruvia-Pastor O., Soh J., Xiao M., Schmidt E., Logan C., Boughner J.C., Jones N., Osborn D., Santiago J., Gittleman J., Hallgrímsson B., Sensen C.W. (2009) Fast Interactive Integration of Cross-Sectional Image Datasets and Surface Data for Morphometric Analysis. Stud Health Technol Inform 142:183-188
  12. Xiao M., Soh J., Merivua-Pastor O., Osborn D., Lam N., Hallgrímsson B., Sensen C.W. (2009) An Efficient Virtual Dissection Tool to Create Generic Models for Anatomical Atlases. Stud Health Technol Inform 142:426-428

Reviewed Poster Papers:

  1. Shu X., Turinsky A., Maurer F., Sensen C.W. (2007) A Case Study on the Implementation of Agile Methods. XP 2007 Conference Proceedings, pp. 169-170

Books edited:

       
     
  1. Glasgow J., Littlejohn T., Major F., Lathrop R., Sankoff D., Sensen C.  [Eds] (1998) Proceedings of the Sixth International Conference on Intelligent Systems for Molecular Biology, AAAI Press, Menlo Park, CA. ISBN 1-57735-053-7
  2. Sensen, C.W. [Ed.] (2001) Genomics and Bioinformatics. Biotechnology 2nd Edition Volume 5b. Wiley-VCH, 462 pages. ISBN 3-527-28328-5 [Amazon.com]
  3. Sensen, C.W. [Ed.] (2002) Essentials of Genomics and Bioinformatics. Wiley-VCH, 428 pages. ISBN 9783527305414 [Amazon.com]
  4. Sensen, C.W. [Ed.] (2005) Handbook of Genome Research. Wiley-VCH, 2 Volumes, 618 pages. ISBN 3-527-31348-6 [Amazon.com]
  5. Sensen, C.W., Hallgrímsson, B. [Eds.] (2009) Advanced Imaging in Biology and Medicine - Technology, Software Environments, Applications. Springer Verlag, Heidelberg, 445 pages. ISBN 978-3-540-68992-8 [Amazon.com]

Online Books edited:

  1. Sensen C.W. [Ed.] (2007) Essentials of Genomics and Bioinformatics. Wiley-VCH, 419 pages. ISBN 9783527612642

Abstract Collections:

  1. Collado-Vides J., Hofestädt R., Sensen C.W. (2006) Integrative Bioinformatics - Aspects of the Virtual Cell. Dagstuhl Seminar Proceedings 04281, 17 pages. ISSN 1861-4405 [online]

Book Chapters:

  1. Sensen, C.W. (1993) Molecular phylogeny of algal plastids: a brief review of host/endosymbiont genome development based on sequence comparisons. In: Lewin, R.A. [ed]: Prochorophytes, Symbiogenesis and the Origins of Plastids, Chapman and Hall, New York, London, pp. 171-192
  2. Sensen C.W., Charlebois R.L., Singh R.K., Klenk H.P., Ragan M.A., Doolittle W.F. (1997) Sequencing the genome of Sulfolobus solfataricus P2. In: de Bruijn F.J., Lupski J.R., Weinstock G.M. [eds.]: Bacterial Genomes: Physical Structure and Analysis, Chapman and Hall, New York, London, pp. 552-558
  3. Gaasterland T., Sensen C.W. (1997) MAGPIE: A Multipurpose Automated Genome Project Investigation Environment for Ongoing Sequencing Projects. In: de Bruijn F.J., Lupski J.R., Weinstock G.M. [eds.]: Bacterial Genomes: Physical Structure and Analysis, Chapman and Hall, New York, London, pp. 559-566
  4. Sensen C.W. (1999) Sequencing Microbial Genomes. In: Charlebois, R.L. [ed.]: Organization of the Prokaryotic Genome. ASM Press, Washington, pp. 1-9
  5. Sensen, C.W. (2001) Genomics - Five years from now. In C.W. Sensen [ed.] Genomics and Bioinformatics. Wiley-VCH, Weinheim, pp 431-439 
  6. Gordon P., Gaasterland T., Sensen C.W. (2001) Genomic Data Representation Through Images: MAGPIE as an Example. In C.W. Sensen [ed.] Genomics and Bioinformatics. Wiley-VCH, Weinheim, pp 379-397 
  7. Sensen, C.W. (2002) Genomics - Five years from now. In C.W. Sensen [ed.] Essentials of Genomics and Bioinformatics.Wiley-VCH, Weinheim, pp. 396-405
  8. Gordon P., Gaasterland T., Sensen C.W. (2002) Genomic Data Representation Through Images: MAGPIE as an Example. In C.W. Sensen [ed.] Essentials of Genomics and Bioinformatics. Wiley-VCH, Weinheim, pp. 345-363
  9. Turinsky A., Gordon P., Xu E., Stromer J., Sensen C.W. (2005) Genomic Data Representation through Images: The MAGPIE/Bluejay System. In C.W. Sensen [ed.] Handbook of Genome Research. Wiley- VCH, Weinheim, pp. 383-413
  10. Sensen C.W. (2005) The Future of Large-Scale Life Science Research. In C.W. Sensen [ed.] Handbook of Genome Research. Wiley- VCH, Weinheim, pp. 573-584
  11. Gordon P., Sensen C.W. (2005) Oligonucleotide Design from Principle to Practice. In A. Markoff [ed.] Analytical Tools for DNA, Genes and Genomes (Nuts & Bolts). DNA Press, Eagleville, PA pp. 255-277
  12. Turinsky A., Sensen C.W. (2008) Virtual Reality Meets Functional Genomics. In S.A. Krawetz [ed.] Bioinformatics for Systems Biology. Humana Press, Totowa, NJ pp. 609-621
  13. Sensen C.W., Soh J. (2009) CAVEman, an Object-Oriented Model of the Human Body. In Sensen, C.W., Hallgrímsson, B. [Eds.] Advanced Imaging in Biology and Medicine - Technology, Software Environments, Applications. Springer Verlag, Heidelberg pp. 289-300
  14. Hallgrímsson B., Boughner J., Turinsky A., Parsons T.E., Logan C., Sensen C.W. (2009) Geometric Morphometrics and the Study of Development. In Sensen, C.W., Hallgrímsson, B. [Eds.] Advanced Imaging in Biology and Medicine - Technology, Software Environments, Applications. Springer Verlag, Heidelberg pp. 319-338
  15. Soh J., Gordon P.M.K., Sensen C.W. (2009) Genomic Data Visualization - The Bluejay System.  In Sensen, C.W., Hallgrímsson, B. [Eds.] Advanced Imaging in Biology and Medicine - Technology, Software Environments, Applications. Springer Verlag, Heidelberg pp. 395-400

Prefaces:

  1. Realism - A Study in Human Structural Anatomy (2003) Kasterstener Publications, Red Deer [online information]

Disclosures:
  1. 36 Position Oligo-prep rotor for SAVANT Oligoprep OP120 Centrifuge (1995/06/30) Creators: Sensen C.W., Morstatt G., Gallant J., Singh R.K.
  2. Osprey - Oligonucleotide Design Software (2005) Creators: Gordon P., Sensen C.W.
  3. Jabiru: A suite of Java 3D Behaviors for Virtual Reality (2009) Creators: Sensen C.W., Stromer J., Quon G., Gordon P.
  4. CAVEman: Java 3D Software for Mapping of Genetic and Medical Information (2009) Creators: Sensen C.W., Turinsky A., Fanea E., Trinh Q.
  5. An Efficient Virtual Dissection Tool to Create Generic Models for Anatomical Atlases (2009) Creators: Sensen C.W., Xiao M., Soh J., Meruvia-Pastor O., Hallgrímsson B., Osborn D.
  6. AlignModel: A Tool for Interactive Manual Registration of Models in 3D Space (2009) Creators: Sensen C.W., Meruvia-Pastor O., Hallgrímsson B., Osborn D., Soh J., Xiao M.
  7. Visual Data Analysis through Level-of-Detail Management (2009) Creators: Sensen C.W., Soh J., Meruvia-Pastor O., Xiao M., Osborn D.

Abstracts and unreviewed Publications:

  1. Sensen, C.W., Melkonian, M. (1992) PHYLIP 3.4 Tips and Tricks. Plant Molecular Evolution Newsletter 1:32-36.
  2. Sensen, C.W., Hinkle, G.J., Sogin, M.L., Melkonian, M. (1992) Spermatozopsis similis gene for 18S rRNA [Sequence Announcement]. Plant Molecular Biology 20:1209
  3. Sensen C.W., Banrevi A., Capesius I. (1993) The 18S rDNA sequence from Pinus wallichiana [Sequence Announcement]. Plant Molecular Biology 24:259
  4. Singh R.K., Sensen C.W., Ragan M (1995) Direct cosmid sequencing (40 kb inserts) NRC internal report No 75
  5. W. Ford Doolittle, Robert L. Charlebois, Mark A. Ragan and Christoph W. Sensen (1996) The Sulfolobus Genome Project: Process and Progress [Plenary Speaker Abstract]. Microbial and Comparative Genomics 1:200
  6. Gaasterland T., Sensen C. (1996) Using Multiple Tools for Automated Genome Interpretation in and Integrated Environment. MCS preprint #P576, 4 pages
  7. Sensen C.W., Gaasterland T., Ragan M.A., Doolittle W.F., Charlebois R.L. (1997) Sequencing and analysis of the Sulfolobus solfataricus P2 genome. Microbial and Comparative Genomics 1:364
  8. Goffeau A., ..., Sensen C., ... et al. (1997) The Yeast Genome Directory. Nature 387 (suppl.):5 (online)
  9. Sensen C.W., Charlebois R.L., Doolittle W.F., Duguet M., Gaasterland T., Garrett R., van der Oost J., Ragan M.A. (1998) Sequencing and analysis of the Sulfolobus solfataricus P2 genome [plenary speaker abstract] Microbial and Comparative Genomics 3:62
  10. Singh R.K., Chow C., Curtia B., Gordon P., Kozera C., Ragan M.A., Sensen C.W. (1998) A strategy for Genome Sequencing in small laboratories: Sulfolobus as an example [poster abstract] Microbial and Comparative Genomics 3:79
  11. Sensen, C.W., Brum J., Gordon P., Hood M., Lindahl G., Schulman M., Spindler C., Stuart M., Unger S. (2002) Establishment of the first Java 3DTM enabled CAVE® - A Whitepaper. [PDF formatted file]
  12. Tjaden B., Zaparty M., Ahmed H., Michalke K., Sensen C.W., Gordon P., Klenk H.-P., Schuster S.C., Hensel R., Siebers B. (2004) From genome to function: reconstruction of the central carbohydrate metabolism in Thermoproteus tenax. (2004) Bioperspectives (Wiesbaden, Germany) conference proceedings.
  13. Sensen C.W. (2004) Bioinformatics and Visual Genomics: Seeing Genes, Proteins and Metabolism. Drug Metabolism Reviews 36:14
  14. Gordon P.M.K., Sensen C.W. (2007) A Pilot Study into the Usability of a Scientific Workflow Construction Tool. Technical Report #2007-874-26. Department of Computer Science, University of Calgary, Canada (online)
  15. Ruecker N.J., Topp E., Edge T.A., Lapen D.R., van Bochove E., Schreier H., Koning W., Miller J., Khan I.U.H., Gannon V., Sensen C.W., Neumann N.F. (2007) Molecular forensic profiling of Cryptosporidium spp. to determine the diversity of fecal contamination in four Canadian w73atersheds. 2007 Water Quality Technology Conference Abstract
  16. Turinsky A., Fanea E., Trinh Q., Dong X., Stromer J., Shu X., Wat S., Hallgrímsson B., Hill J.W., Edwards C., Grosenik B., Yajima M., Sensen C.W. (2008) Integration of Genomic and Medical Data into a 3D Atlas of Human Anatomy. Medicine Meets Virtual Reality Conference Abstract
  17. Cooper D.M.L., Clement J.G., Thomas C.D.L., Hallgrímsson B., Turinsky A.L., Sensen C.W., Goldman H. (2008) Advances in High Resolution Imaging and the Emerging Application of 3D Cortical Bone Histomorphometry in interpreting Health. AAPA 2008 Conference Abstract
  18. Zadeh Z.E., Hittel D., Severson D., Hepple R., Sensen C., Shearer J. (2008) Status - Hight Fat Feeding Increases Mitochondrial Content While Compromising Outer Membrane Integrity in the Mouse Heart. Obesity 16:731, S261
  19. Martinez A., Gordon P., Sensen C.W., Trelles O. (2009) Towards closing the gap between user data and standardized input. NETTAB 2009 Conference Proceedings [in press]
  20. Peng F.Y., Sensen C.W., Weselake R.J. (2009) A Bioinformatics Approach for Decyphering Transcriptional Regulation of Seed Storage Reserve Accumulation in Arabidopsis. 7th Canadian Plant Genomics Workshop, Saskatoon

Electronic Publications:

  1. Sensen C.W. (1997) Bioinformatic Skills: Hot Skills Sets. Science’ Next Wave.
  2. Sensen C.W. (1998) Library and Information Science: A Day in the Life of a Biologist - Information Scientist. Science’s Next Wave.
  3. Sensen C.W. (1998) A Network Carol (How EMBnet Canada was Born). EMBnet News.
  4. Sensen C.W., Dalton T.E., Brousseau R., Clark F., Crosby W., Foxall R.A., Liu Q.Y., Hemmingsen S., Nash J., Ragan M.A., Thomas D.Y., Wood G., van der Meer J.P. (2000) The Canadian Bioinformatics Resource - New Opportunities for Bionformatics in Canada - TERENA Networking Conference Online Proceedings. [PDF formatted file]

Posters:

  1. Botanikertagung 1990 (Regensburg): Christoph W. Sensen, Ralf Kämmerer, Barbara Thiel, Brigitte Walter und Michael Melkonian: Charakterisierung der plastidären DNA von Spermatozopsis similis Preisig et Melkonian, 1984 (Chlorophyceae)
  2. Botanikertagung 1990 (Regensburg): Kirsten Heimann, Christoph W. Sensen und Michael Melkonian: Der Einsatz eines Zellsorters FACS-440 zur Erzeugung axenischer Klonkulturen von begeißelten Algen.
  3. Genome Mapping and Sequencing 1993 in Cold Spring Harbor (U.S.A.): C. Schwager, S. Wiemann, T. Rupp, H. Voss, C. Sensen, J. Zimmermann and W. Ansorge: GeneSkipper - A software environment for DNA sequence assembly and analysis of large scale sequencing projects: Sequence analysis of cosmids from S. cerevisiae chromosome XI.
  4. Genome Mapping and Sequencing 1993 in Cold Spring Harbor (U.S.A.): H. Voss, S. Wiemann, D. Grothues, C. Sensen, T. Rupp, J. Zimmermann, C. Schwager and W. Ansorge: Strategy for directed primer walking on plasmid and cosmid DNA from chromosome XI of S. cerevisiae using T7 DNA Polymerase and Fluorescein-15-*dATP as internal label.
  5. Genome Mapping and Sequencing 1993 in Cold Spring Harbor (U.S.A.): J. Zimmermann, H. Voss, S. Wiemann, C. Sensen, C. Schwager, H. Erfle, J. Stegemann, T. Rupp, D. Grothues, and W. Ansorge: Fully Automated double stranded Sequencing Reactions with fluorescently labelled primers and Fluorescein-15-dATP.
  6. Yeast Genome Sequencing Network 1994 in Manchester (U.K.): D.Grothues, C. Sensen, H. Voss, A. Banrevi, C. Teodoru, C. Schwager, S. Rechmann, T. Rupp, H. Drzonek, V. Benes, C. Vlcek, S. Wiemann, W. Ansorge: Sequencing of 50 kb on S. cerevisiae chromosome XV.
  7. Genome Mapping and Sequencing 1994 in Cold Spring Harbor (U.S.A.): C. Schwager, S. Wiemann, C. Sensen, T. Rupp and W. Ansorge: GeneSkipper - an integrated software environment for DNA sequence assembly and analysis in megabase scale sequencing projects.
  8. Genome Mapping and Sequencing 1994 in Cold Spring Harbor (U.S.A.): H. Voss, D. Grothues, C. Sensen, V. Benes, C. Vlcek, A. Banrevi, C. Teodoru, T. Rupp, H. Drzonek, S. Wiemann, S. Rechmann, C. Schwager, J. Zimmermann and W. Ansorge: Efficient low-redundancy DNA sequencing in the course of the Saccharomyces cerevisiae genome project.
  9. National Science Foundation Hypothermophiles Workshop 1995 in Athens, GA (U.S.A): Charlebois R.L., Ragan M.A., Sensen C.W., Klenk H.P., Doolittle W.F.: The Sulfolobus solfataricus Genome Sequencing Project
  10. CIAR Evolutionary Biology Program 1995 Annual Meeting in Val Morin: Gaasterland T., Sensen C.W.: MAGPIE: A Multipurpose Automated Genome Project Investiagion Environment for Ongoing Sequencing Projects.
  11. Genome Mapping and Sequencing 1996 in Cold Spring Harbor (U.S.A.): Gaasterland T., Sensen C.W.: MAGPIE: Automating Whole Genome Analysis.
  12. Genome Mapping and Sequencing 1996 in Cold Spring Harbor (U.S.A.): Sensen C.W., Charlebois R.L, Ragan M.A., Doolittle W.F.: Sequencing and Analysis of the Sulfolobus solfataricus P2 genome.
  13. Archaeal Gordon Conference 1996 in Plymouth/N.H. (U.S.A.): Klenk, H.P., Keeling, P.J., Schenk, M.E., Singh, R.K., Doolittle, W.F., Sensen, C.W.: Sulfolobus islandicus multicopy plasmid family pRN1/pRN2.
  14. CIAR Evolutionary Biology Program 1997 Annual Meeting in Ottawa: Gaasterland T., Sensen C.W.: Annotating Genomes with MAGPIE.
  15. Microbial Genomes II Sequencing, Functional Characterization and Comparative Genomics 1998 in Hilton Head (U.S.A.): Singh R.K., Chow C., Curtis B., Gordon P., Kozera C., Ragan M.A., Sensen C.W.: A Strategy for Genome Sequencing in Small Laboratories: Sulfolobus as an example.
  16. Extremophiles (1998) in Brest, France: Napoli A., van der Oost J., Sensen C., Rossi M., Ciaramella M.: A gene encoding a bacterial-like transcription regulation factor in Sulfolobus solfataricus.
  17. Jahrestagung 1999 der Vereinigung für Allgemeine und Angewandte Mikrobiologie e.V. in Göttingen: Jacobi C., Klenk H.P., Sensen C., Fritz H.-J., Gottschalk G.: Methanosarcina mazei, sequencing the first member of the third order of Methanogens.
  18. 6th International Congress on Plant Molecular Biology (ISPMB) in Quebec City (2000): Sensen C.W.: The Canadian Bioinformatics Resource.
  19. Canadian Society of Animal Science (CSAS) in Quebec City (2002): Hansen C., Fu A., Meng Y., Li C., Okine E., Sensen C.W., Gordon P., Moore S.S.: The Bovine Gastrointestinal Tract: A Gene Expression Profile.
  20. Conference of the International Society of Animal Genetics (ISAG) in Göttingen (2002): Hansen C., Fu A., Meng Y., Li C., Okine E., Sensen C.W., Gordon P., Moore S.S.: The Bovine Gastrointestinal Tract: A Gene Expression Profile.
  21. Intelligent Systems for Molecular Biology (ISMB) in Edmonton (2002): Gordon P., Sensen C: Osprey: An Application for a Wide Range of Oligonucleotide Design Tasks.
  22. Intelligent Systems for Molecular Biology (ISMB) in Edmonton (2002): Pan Y., Sensen C.W., Heywood M., Shepherd M.: Integration of Exon Predictions Using Multilayer Perceptron and Mixture of Experts Neural Networks.
  23. AAA Experimental Biology 2004: Cooper D.M.L., Turinsky A.L., Sensen C.W., Hallgrimsson B.: A 4D Perspective on Cortical Bone Remodelling by Micro-CT.
  24. iCORE Summit 2005 in Banff: Dong A., Gordon, P.M.K., Turinsky A.L., Sensen C.W.: GC skew in Bluejay.
  25. iCORE Summit 2005 in Banff: Stromer J.N., Turinsky A.L., Sensen C.W.: JABIRU: Integrating Software Based Volume Rendering and Interaction into Immersive 4D Bioinformatics.
  26. iCORE Summit 2006 in Banff: Sensen C.W., Soh J., Gordon P., Dong A., Taschuk M., Borowski K: 2D Bioinformatics: Enhancing the Bluejay Browser with new Functions
  27. iCORE Summit 2006 in Banff: Sensen C.W., Turinsky A., Dong X., Fanea E., Shu X., Stromer J., Wat S.: 4D Bioinformatics: Mining Medical and Genomics Data in Virtual Patients.
  28. iCORE Summit 2007 in Banff: Gordon P., Barker K., Sensen C.W.: Getting Biologists to Write Programs, Without Them Even Knowing It.
  29. iCORE Summit 2007 in Banff: Soh J., Gordon P., Taschuk M., Dong A., Sensen C.W.: Genome Browsing and Comparison in Bluejay Using Text View and Waypoints.
  30. Intelligent Systems for Molecular Biology (ISMB) in Toronto (2008): Gordon P., Wilkinson M., Sensen C.: Making the Semantic Web Usable for Biologists.
  31. iCORE Summit 2008 in Banff: Xiao M., Soh J., Meruvia O., Osborn D., Lam N., Hallgrímsson B., Sensen C.W.: An Efficient Virtual Dissection Tool to Create Generic Models for Anatomic Atlases.
  32. iCORE Summit 2008 in Banff: Meruvia-Pastor O., Xiao M., Schmidt E., Osborn D., Logan C., Boughner J., Santiago J., Gittleman J., Hallgrímsson B., Sensen C.W.: Integrating Cell Proliferation and Morphometrical Data for Development Analysis of Mice.
  33. iCORE Summit 2009 in Banff: Soh J., Meruvia-Pastor O., Xiao M., Tang P., Lim E., Wishart D., Sensen C.W.: Visual Integration of Pharmacokinetics Data in the CAVEman System
  34. iCORE Summit 2009 in Banff: Xiao M., Soh J., Meruvia-Pastor O., Schmidt E., Hallgrímsson B., Sensen C.W.: Building Generic Anatomical Models Using Virtual Cutting and Iterative Registration.
  35. iCORE Summit 2009 in Banff: Meruvia-Pastor O., Soh J., Schmidt E., Boughner J.C., Xiao M., Jamnizcky H.A., Hallgrímsson B., Sensen C.W.: Cell Distribution for Morphometrics Analysis Using Incremental Cell Search on Histology Samples of Mice Embryos.

Talks:

  1. 2. wissenschaftliche Tagung der Sektion Phykologie in der Deutschen Botanischen Gesellschaft in Hofgeismar (1991): C. W. Sensen, C. Matzke, B. Marin und T. Helmchen: Untersuchungen zur Systematik der Gruppe Tetraselmis.
  2. Fourth International Phycological Congress (1991), Duke University, North Carolina, U.S.A.: Christoph W. Sensen, Christoph Matzke, Birger Marin, Thomas Helmchen and Michael Melkonian: New results on the taxonomy of the genus Tetraselmis (Prasinophyceae).
  3. Symbiogenesis Prochlorophytes and the origins of plastids (1991) at the Bodega Marine Laboratory, University of California Davis, U.S.A. [invited talk]: Christoph Sensen: Molecular phylogeny of algal plastids: Research on host/endosymbiont genome codevelopment and sequence comparisons.
  4. EMBO PRACTICAL COURSE (1991) at the Genetisches Institut der Universität zu Köln: Flow Cytometry, A tool in Cellular and Molecular Biology: Christoph W. Sensen: The production of axenic cultures from flagellated algae via flow cytometry.
  5. Botanikertagung 1992 in Berlin: C. W. Sensen und M. Melkonian: Molekulare Phylogenie von Spermatozopsis similis Preisig et Melkonian, 1984 (Chlamydomonadales).
  6. wissenschaftliche Tagung der Sektion Phykologie in der Deutschen Botanischen Gesellschaft in Leichlingen (1993): C. W. Sensen und B. Walter: Einige Bemerkungen zu den Internal Transcribed Spacer- Regionen von Spermatozopsis similis.
  7. BRIDGE-BIOTECH YEAST GENOME SEQUENCING MEETING in Louvain-La-Neuve (B) (1993): S. Wiemann, H. Voss, T. Rupp, D. Grothues, C. Sensen and W. Ansorge: Sequencing of six neighbouring EcoRI fragments of cosmid UKG041 from chromosome XI.
  8. BRIDGE-BIOTECH YEAST GENOME SEQUENCING MEETING in Louvain-La-Neuve (B) (1993): D. Grothues, C. Sensen H. Voss, S. Wiemann and W. Ansorge: Sequencing of 200 random clones for the final verification step of chromosome XI.
  9. Genome Mapping and Sequencing 1993 in Cold Spring Harbor (U.S.A.): W. Ansorge, D. Grothues, H. Erfle, N. Hewitt, T. Rupp, C. Schwager, C. Sensen, H. Voss, S. Wiemann and J. Zimmermann: Automated DNA sequencing facility for large scale projects: Efficiency with long readings (1000 bases), low redundancy (2-3 times) and throughput up to 100 Kilobases.
  10. ISEP-10 in Halifax (1994): C. W. Sensen and C. Schwager: The CS-Editor, a new multiple alignment editor for MS-Windows 3.1.
  11. CIAR Evolutionary Biology Program 1994 Annual Meeting in Halifax: M. Ragan, R. Charlebois, C .Sensen: The Sulfolobus project.
  12. Third International E. coli Genome Meeting in Woods Hole U.S.A. (1994): C. Sensen: The Sulfolobus solfataricus genome project.
  13. Sequencing of Bacterial Genomes in Worcester (England) (1995): C. Sensen Sulfolobus genome project. [invited talk]
  14. Glaxo/Wellcome Research Triangle Park, 29.09.1995: C. Sensen Sulfolobus genome project. [invited talk]
  15. Glaxo/Wellcome Stanstedt, England, 17.10.1995: C. Sensen Sulfolobus genome project. [invited talk]
  16. Institut Pasteur, Paris 18.10.1995 [invited talk]: C. Sensen Sulfolobus genome project.
  17. Modelling and Simulation of Metabolic Regulation and Cell Differentiation, Schloss Dagstuhl, Germany (1995): C. Sensen Providing the data for the reconstruction of Metabolic Pathways - From the genome sequencing perspective - . [invited talk]
  18. Dalhousie University, Biology Department, 17.11.1995: C. Sensen Sulfolobus genome project. [invited talk]
  19. Washington University / St. Louis, School of Medicine, 19.02.1996: C. Sensen Sulfolobus genome project. [invited talk]
  20. Washington University / St. Louis, Institute for Biomedical Computing, 20.02.1996: C. Sensen Computational strategies for Whole Genome Analysis. [invited talk]
  21. University of Chicago, Department of Biochemistry, 22.02.1996: C. Sensen Sulfolobus genome project. [invited talk]
  22. Argonne National Laboratory, International workshop on Computational Strategies for Whole Genome Analysis, 15.05.1996: C. Sensen Sulfolobus genome project.
  23. Archaeal Gordon Conference 1996 in Plymouth/N.H. (U.S.A.): T. Gaasterland, C. Sensen Sulfolobus solfataricus P2 genome project. [invited talk]
  24. Thermophiles’96 in Athens/Georgia (U.S.A.) [invited talk]: W.F. Doolittle, R.L. Charlebois, M.A. Ragan, C.W. Sensen: The Sulfolobus genome project: Process and Progress. [invited talk]
  25. Eigth International Genome Sequencing and Analysis Conference 1996 in Hilton Head (U.S.A.): W.F. Doolittle, R.L. Charlebois, M.A. Ragan, C.W. Sensen: The Sulfolobus genome project: Process and Progress.
  26. Dalhousie University, Biochemistry Department, 31.10.1996: C. Sensen: Sequencing and Analysis of the Sulfolobus solfataricus P2 genome. [invited talk]
  27. Small Genomes: Sequencing, Functional Characterization and Comparative Genomics, 1997 in Hilton Head (U.S.A.): C.W. Sensen, T. Gaasterland, M.A. Ragan, W.F. Doolittle, R.L. Charlebois: Sequencing and Analysis of the Sulfolobus solfataricus P2 genome. [invited talk]
  28. National University of Singapore, 1997: C.W. Sensen: New opportunities for bioinformatics in Canada.
  29. ANGIS (Sydney, Australia), 1997: C.W. Sensen: Sequence production and data analysis in the Sulfolobus solfataricus P2 genome.
  30. University of Bielefeld (Germany), 1997: C.W. Sensen: Sequencing and analysis of the Sulfolobus solfataricus P2 genome. [invited talk]
  31. JAMSTEC Extremophiles Conference in Yokohama, Japan (1998): Christoph W. Sensen: Sequencing and Analysis of the Sulfolobus solfataricus P2 genome. [invited talk]
  32. Microbial Genomes II: Sequencing, Functional Characterization and Comparative Genomics in Hilton Head, U.S.A. (1998): Christoph W. Sensen: Sequencing and Analysis of the Sulfolobus solfataricus P2 genome. [invited talk]
  33. GCB’98 in Bergisch Gladbach (Germany) 1998: Christoph W. Sensen: Automated Genome Analysis using MAGPIE. [invited talk]
  34. Keystone Meeting: Archaea, bridging the gap between Bacteria and Eukarya in Taos, NM, U.S.A. (1999): Christoph W. Sensen: Analyzing the Sulfolobus solfataricus P2 genome. [invited talk]
  35. 17. DECHEMA-Jahrestagung der Biotechnologen (1999) in Wiesbaden, Germany: Christoph W. Sensen, Paul Gordon, Philip Denno and Terry Gaasterland: Automated Genome Analysis and Annotation. [invited plenary talk]
  36. GSC'99, the 43rd Annual Meeting of the Genetics Society of Canada (1999) at McGill in Montreal: Christoph W. Sensen: Sequencing and Analysis of the Sulfolobus solfataricus P2 genome. [invited talk]
  37. Rendez-vous BioAtlantech 1999 in Fredericton, New Brunswick, Canada: Christoph W. Sensen: The Impact of Bioinformatics on the Future of Biotechnology - New Opportunities for Bioinformatics in Canada. [invited talk]
  38. Ottawa Life Sciences Council Meeting 1999: Christoph W. Sensen: Mining Microbial Genomes. [invited talk]
  39. Federal University of Rio de Janeiro, Brazil, 1999: Christoph W. Sensen: Automated Genome Annotation: Sulfolobus as an example.
  40. University of Victoria, 2000: Christoph W. Sensen: The Canadian Bioinformatics Resource [invited talk]
  41. University of Victoria, 2000: Christoph W. Sensen: The Sulfolobus solfataricus P Genome Project - final stage - [invited talk]
  42. Federal University of Rio de Janeiro, Brazil, 2000: Christoph W. Sensen: Automated Genome Annotation. [invited talk]
  43. TECPAR, Curitiba, Brazil, 2000: Christoph W. Sensen: Bioinformatics in Canada. [invited talk]
  44. BIOTEC Thailand, Bangkok, 2000: Christoph W. Sensen: Bioinformatics in Canada.
  45. Bio2000, Boston, 2000: Christoph W. Sensen: The Canadian Bioinformatics Resource. [invited talk]
  46. Computational Challenges in the Post-Genomic Age, San Francisco, 2000: Christoph W. Sensen: Distributed Computing for Bioinformatics. [invited talk]
  47. TERENA Networking Conference 2000 in Lisbon, Portugal: Christoph W. Sensen: The Canadian Bioinformatics Resource, CBR-RBC, a model for a distributed national bioinformatics facility [invited talk]
  48. 6th International Congress on Plant Molecular Biology (ISPMB) in Quebec City (2000): Christoph W. Sensen: The Canadian Bioinformatics Resource. [invited talk]
  49. 1. Herbst-Workshop der VAAM Fachgruppe Funktionale Genomanalyse in Tutzing (Munich), Germany (2000): Christoph W. Sensen: Automated Genome Annotation. [invited talk]
  50. Technology Forum "Securing Alberta's Future through Technology Innovations" in Calgary (2000): Christoph W. Sensen: Genomics Based Medicine. [invited talk]
  51. Sun Microsystems Informatics Advisory Council Meeting in San Francisco (2000): Christoph W. Sensen: Genomic Data Analysis at CBR.. [invited talk]
  52. Canadian Society of Biochemistry, Molecular & Cellular Biolology, 44th Annual Meeting in Alliston, Ontario (2001): Christoph W. Sensen: Visualizing Genomic Information [invited talk]
  53. Calgary Innovation Center Forum (2001): Christoph W. Sensen: Bioinformatics [invited talk]
  54. University of Lethbridge (2001): Christoph W. Sensen: Automated Genome Annotation [invited talk]
  55. University of Alberta (2001): Christoph W. Sensen: Automated Genome Annotation [invited talk]
  56. Biofuture 2001 in Toronto, Ontario: Christoph W. Sensen: Automated Genome annotation [invited talk, keynote]
  57. Satellite to the 8th International Conference on Environmental Mutagens (2001) in Seattle: Christoph W. Sensen: Automated Genome Annotation - Visualizing Genomic Information [invited talk]
  58. Calgary Council for Advanced Technologies breakfast (2001): Christoph W. Sensen: Bioinformatics Challenges for Genome Canada [invited talk]
  59. Alberta Cancer Board Annual Research Meeting 2001 in Banff: Christoph W. Sensen: The impact of bioinformatics on cancer research [invited talk] 
  60. SuperG (Sun Users Performance Group) Meeting in Waikiki Beach, Hawaii (2002): Christoph W. Sensen: Adding the Third Dimension to Bioinformatics: Building the first Java 3D enabled CAVE on the Sun Fire Platform and Fakespace Systems Inc. CAVE Technology [invited talk, keynote]
  61. The 11th Biennial University of Alberta - University of Calgary Conference on Infectious Diseases in Banff (2002): Christoph W. Sensen: Genome Annotation: From 2D to 4D [invited talk]
  62. 2002 ACMC-ACAHO-CAME Annual Meeting in Calgary: Christoph W. Sensen: Sun Center of Excellence for Visual Genomics [invited talk]
  63. Grid Computing in Canada in Edmonton (2002): Christoph W. Sensen: CBR goes GRID [invited talk]
  64. National Genomics Conference (Genome Canada) in Montreal (2002): Christoph W. Sensen: An Integrated and Distributed Bioinformatics Platform for Genome Canada [invited talk]
  65. ideaCity02 in Toronto (2002): Christoph W. Sensen: Using CAVE environments for Genomics [invited talk]
  66. La Conference de Montreal (2002): Christoph W. Sensen: Bioinformatics R&D at the University of Calgary [invited talk]
  67. IT concepts and Software Solutions in Life Sciences and Computational Chemistry in Ulm, Germany (2002): Christoph W. Sensen: Bioinformatics goes 4D [invited talk]
  68. Sun Special Interest Group (SIG) Computational Biology in Glasgow, Scotland (2002): Christoph W. Sensen: Genome Canada GRID [invited talk]
  69. Sun HPC Consortium in Glasgow, Scotland (2002): Christoph W. Sensen: Bioinformatics goes 4D [invited talk]
  70. Association of University Technology Managers (AUTM) Canadian Regional Meeting in Calgary (2002): Christoph W. Sensen: Bioinformatics goes 4D: Using CAVE environments for Genomics [invited talk]
  71. University of Saskatchewan (2002): Christoph W. Sensen: 4D Bioinformatics [invited talk]
  72. Sun Special Interest Group (SIG) Computational Biology in Santa Clara (2002): Christoph W. Sensen: 4D Bioinformatics [invited talk]
  73. Sun Microsystems Informatics Advisory Council Meeting in Santa Clara (2002): Christoph W. Sensen: 4D Bioinformatics [invited talk]
  74. Department of Energy in Hanford (2002): Christoph W. Sensen: 4D Bioinformatics [invited talk]
  75. University of Bielefeld (2002): Christoph W. Sensen: 4D Bioinformatics [invited talk]
  76. First Genoma España - Genome Canada Partnering Symposium in Madrid, Spain (2003): Christoph W. Sensen: Bioinformatics Platform [invited talk]
  77. iCORE Extreme Computing in Palo Alto (2003): Christoph W. Sensen: 4D Bioinformatics [invited talk]
  78. Southern Section of the American Society of Plant Biologists in Denton, Texas (2003): Christoph W. Sensen: 4D Bioinformatics [invited talk]
  79. Calgary Council for Advanced Technologies Bioinformatics event (2003): Christoph W. Sensen: The Sun Center of Excellence for Visual Genomics [invited talk]
  80. University of Calgary, Department of Biology (2003): Christoph W. Sensen: 4D Bioinformatics [invited talk]
  81. International Workshop on Bovine Genomics in Montreal (2003): Christoph W. Sensen: Post-Sequencing Activities: Academic Perspective [invited talk]
  82. Advanced Display Environments Workshop at the Arctic Region Supercomputing Center in Fairbanks, Alaska (2003): Christoph W. Sensen: A Java-3D enabled CAVE [invited talk]
  83. First Canadian Plant Genomics Workshop in Saskatoon (2003): Christoph W. Sensen: The Genome Canada Bioinformatics Platform [invited talk]
  84. First Canadian Plant Genomics Workshop in Saskatoon (2003): Christoph W. Sensen: Bluejay Demo [invited talk]
  85. International Nano Forum in Palo Alto, CA (2003): Christoph W. Sensen: Exploring Small Molecules Big Time [invited talk]
  86. National Genomics and Proteomics Symposion in Toronto (2003): Christoph W. Sensen: An Integrated and Distributed Bioinformatics Platform for Genome Canada [invited talk]
  87. University of Arkansas at Little Rock (2004): Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  88. 2nd International E. coli Alliance Conference on Systems Biology Project Gemini in Banff (2004): Christoph W. Sensen: MAGPIE and Bluejay: Tool and Data Integration for Systems Biology
  89. Germany-Canada / Agricultural-Genomics Team-building at the Rafter Six Ranch in Kananaskis (2004): Christoph W. Sensen: Bioinformatics in the Age of Systems Biology [invited talk]
  90. Integrative Bioinformatics - Aspects of the Virtual Cell. Schloss Dagstuhl, Germany (2004): Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  91. Bioinformatics Colloqium at the Ludwig Maximilians Universität in Munich, Germany (2004): Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  92. 7th International ISSX Meeting in Vancouver (2004): Christoph W. Sensen: Bioinformatics and Visual Genomics: Seeing Genes, Proteins and Metabolism. [invited talk]
  93. Fourth Virtual Conference on Genomics and Bioinformatics (2004): Christoph W. Sensen: Bluejay: A Biological Sequence Browser featuring Knowledge Integration [invited talk]
  94. Plant Biotechnology Institute in Saskatoon (2004): Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  95. National Genomics and Proteomics Symposium in Vancouver (2004) Christoph W. Sensen: An Integrated and Distributed Bioinformatics Platform for Genome Canada [invited talk]
  96. 5th Annual Spanish Bioinformatics Conference in Barcelona, Spain (2004) Christoph W. Sensen: From 2D to 4D Bioinformatics: Using the Genome Canada Bioinformatics Platform for Science [invited talk]
  97. Das Bild in der Wissenschaft, Berlin (2004) Christoph W. Sensen: Making Virtual Reality of a Fantastic Voyage [invited talk]
  98. BioInnovation Center Dresden (2004) Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  99. Advanced Digital Technology in Head and Neck Reconstruction in Banff (2005): Christoph W. Sensen: 4D Bioinformatics and Medical Informatics [invited talk]
  100. World Congress on Microarray Technology in Vancouver (2005): Christoph W. Sensen: Visual Representation of Gene Expression Patterns using Bluejay [invited talk]
  101. Western GRID Summit in Banff (2005): Christoph W. Sensen: GRID and Visualization Efforts at the Sun Center of Excellence for Visual Genomics [invited talk]
  102. VanBUG talk in Vancouver (2005): Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  103. First Genome Canada - Genome Denmark meeting in Copenhagen (2005): Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  104. The IASTED International Conference on Telehealth in Banff (2005): Christoph W. Sensen: Making Virtual Reality of a Fantastic Voyage [invited talk, keynote]
  105. 53rd Meeing of the American Academy of Maxillofacial Prosthetics in Los Angeles (2005): Christoph W. Sensen: Using Virtual Reality Environments for Medical Research [invited talk]
  106. ICE 2005 - The Tech Conference in Edmonton: Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  107. Rocky '05 in Aspen (2005): Christoph W. Sensen: Visualizing Bioinformatics Results [invited keynote]
  108. GfKl 2006 in Berlin: Christoph W. Sensen: From 2D to 4D Bioinformatics [invited Semi-Plenary Lecture]
  109. CFBS 49th Annual Meeting in Saskatoon (2006): Christoph W. Sensen: Three-Dimensional Presentation of Data [Plenary Lecture]
  110. CFIA Lethbridge (2007): Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  111. PrP Canada (2007) in Calgary: Christoph W. Sensen, Stefanie Czub, Catherine Graham, Ekkehard Schütz, Howard Urnovitz: Preliminary Characterization of Chronic Wasting Disease in Elk
  112. Helmholtz Centre for Infection Research in Braunschweig, Germany (2008): Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  113. Calgary Java Users Group (2008): Christoph W. Sensen: CAVEman, the world's first object-oriented model of human anatomy [invited talk]
  114. Eighth Annual International Conference of the Canadian Proteomics Initiative (CPI) 2008 in Vancouver: Christoph W. Sensen: From 2D to 4D Bioinformatics [invited talk]
  115. EBI Cambridge (2008): Christoph W. Sensen: The Bluejay Genome Browser.
  116. 3rd Intnernational Confence of Advanced Digital Technology in Head and Neck Reconstruction in Cardiff, UK (2008): Christoph W. Sensen: Touring into Human Anatomy for Virtual Head and Neck Surgery
  117. Technische Universität Graz, Austria (2008): Christoph W. Sensen: Tools for Genome Analysis and Annotation and the Unraveling of Gene Function [invited talk]
  118. International Symposium on Integrative Bioinformatics, Lutherstadt Wittenberg, Germany (2008): Christoph W. Sensen: Visual Comparison of Multiple Gene Expression Datasets in a Genomic Context
  119. Iconologia Symposium - Images in Transdisciplinary Perspectives - at Queen's University in Kingston (2008): Christoph W. Sensen: An Anatomical Model of the Human Body in Virtual Reality [invited talk]
  120. Sanofi Aventis Biotalent Challenge Calgary Awards Ceremony (2009): Christoph W. Sensen: Creating CAVEman [invited talk]
  121. Prionet Canada Video-conferencing Regional PrP Seminar Series (2009): Christoph W. Sensen: Characterization of DNA Sequences from Circulating Nucleic Acid Sequences in CWD-infected Elk [invited talk]
  122. From Baden to Banff (2009): Christoph W. Sensen: Towards a Life Testing System for Chronic Wasting Disease and BSE [invited talk]
  123. APRI Live Animal Testing & the Clinical and Biological Perspective of Atypical BSE Workshop in Edmonton (2009): Christoph W. Sensen: TSE-specific Sequences can be Identified in Circulating Nucleic Acids from Experimentally Infected Live Elk and Cattle [invited talk]
  124. Computer and Systems Biology Kolloquium at the HZI Braunschweig, Germany (2009): Christoph W. Sensen: Studien zur Wirt-Pathogen Interaktion [invided talk]
  125. Prokagenomics in Göttingen, Germany (2009): Christoph W. Sensen: From Mycoplasma capricolum to 1000 complete microbial genomes: Building genome analysis and annotation tools for 15 years [invited talk]
  126. CeBiTec Kolloquium in Bielefeld, Germany (2009): Christoph W. Sensen: From 2D Bioinformatics to 4D Systems Biology [invited talk]

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01.03.2010